http://www.the-scientist.com/?articles.view/articleNo/32603/title/Predicting%20Publishing%20Futures http://www.nature.com/nature/journal/v489/n7415/full/489201a.html http://klab.smpp.northwestern.edu/h-index.html
Archive for the 'SciLit' Category
Predicting Publishing Futures | The Scientist Magazine(R)
October 19, 2012Spectrum of somatic mitochondrial mutations in five cancers
October 19, 2012http://www.pnas.org/content/109/35/14087.abstract
Allusion to whole genome data, but focus is on coding regions & mitochondrial mutations
Flows of Research Manuscripts Among Scientific Journals Reveal Hidden Submission Patterns
October 12, 2012Observation of dually decoded regions of the human genome using ribosome profiling data Genome Res. 2012
October 8, 2012A transcriptomic hourglass in plant embryogenesis
October 6, 2012PPI networks refined by 3D structure
October 6, 2012http://www.nature.com/nature/journal/vaop/ncurrent/abs/nature11503.html
Doesn’t seem to refer to SIN, Dynasin or that much earlier work on structural interaction network
Exome sequencing and the genetic basis of complex traits
September 30, 2012Figure 1 in a recent Nature Genetics paper useful for LOF — saturation of LoF, essentially something that describes how many LoF variants we see as we keep adding more samples :
http://www.nature.com/ng/journal/v44/n6/full/ng.2303.html
QT:”
Basically, LoF variants are so enriched for ultra-rare variants that they show no sign of saturation, and the catalogue will continue to grow as more and more exomes are sequenced.
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Dissecting the genomic complexity underlying medulloblastoma : Nature : Nature Publishing Group
September 26, 2012http://www.nature.com/nature/journal/v488/n7409/full/nature11284.html
Appears there’s germline variant calls (from JK) for potentially ~125 matched pairs
Fast gapped-read alignment with Bowtie 2
September 25, 2012http://www.nature.com/nmeth/journal/v9/n4/full/nmeth.1923.html
perhaps useful for SVs?
deep sequence in LRRK2 domain in 14002 individuals
September 24, 2012http://onlinelibrary.wiley.com/doi/10.1002/humu.22075/abstract
Indep. evolution of a disease mutation
linkstream2 microblog 