Posts Tagged ‘cmptxn’

A wider field of view to predict expression | Nature Methods

November 10, 2021

A gene sequence-to-expression machine learning model achieves improved accuracy by incorporating information about potential long-range interactions.

Yang Young Lu and William Staford Noble

Reference component analysis of single-cell transcriptomes elucidates cellular heterogeneity in human colorectal tumors : Nature Genetics : Nature Research

May 6, 2017

Ref component analysis..of transcriptomes, by @Robson_Paul &co Clustering similarity of samples to tissue references

Evolution of Bow-Tie Architectures in Biology

April 28, 2017

Evolution of BowTie Architectures 3-layer, in-mid-out systems can have small a waist when their goal is compressible

Species-Specific | The Scientist Magazine(R)

September 6, 2015

Scientists uncover striking differences between mouse and human gene expression across a variety of tissues.
By Jyoti Madhusoodanan | November 17, 2014

The results “go a little against the grain,” said bioinformatician Mark Gerstein of Yale University who was not involved in the study. “We might think that humans and mice are very similar [genetically], but when we compare their transcriptomes, they’re more different than we thought.”

Lessons from modENCODE

July 11, 2015

Circadian Enhancers Coordinate Multiple Phases of Rhythmic Gene Transcription In Vivo

April 5, 2015

Circadian #Enhancers Coordinate… Rhythmic… Transcription
Periodicity helps find #eRNAs/enhancers & their targets

Tiny, Vast Windows Into Human DNA –

September 6, 2014

Genomics Links Humans to Insects – PNC Voice | PNC Voice

September 6, 2014

In humans, worms and flies, shared genetics | Yale Daily News

September 5, 2014

Expanding ENCODE | The Scientist Magazine(R)

August 31, 2014