Posts Tagged ‘fromtalk’

VesSAP

April 29, 2022

http://discotechnologies.org/VesSAP/

School of Data Science Promotion and Tenure Policy_FINAL.pdf

September 26, 2021

https://api.dsi.virginia.edu/sites/default/files/attachments/2020-04/School%20of%20Data%20Science%20Promotion%20and%20Tenure%20Policy_FINAL.pdf

Frontiers | InferBERT: A Transformer-Based Causal Inference Framework for Enhancing Pharmacovigilance | Artificial Intelligence

July 31, 2021

Nice talk by W Tong at #ISMBECCB21 (CAMDA session) discussing the FDA perspective on how to do AI for regulatory science. He presents the TRIAL framework: transparency, reliability, interpretability, applicability & liability. #ISMBECCB2021

In relation to interpretability, he discusses InferBert
(https://www.frontiersin.org/articles/10.3389/frai.2021.659622/full) which builds a Bayesian causality framework (using the Do-calculus) for interpreting the BERT transformer based model. #ISMBECCB21 #ISMBECCB2021

Superspreading and the effect of individual variation on disease emergence | Nature

June 3, 2020

https://www.nature.com/articles/nature04153

J. O. Lloyd-Smith, S. J. Schreiber, P. E. Kopp & W. M. Getz
Nature volume 438, pages355–359(2005)

#1 Meal Kit Delivery Service | Fresh Meal Delivery | HelloFresh

June 3, 2020

https://www.hellofresh.com/

How much bacteria is on a child’s hand after playing outside?

November 24, 2019

https://www.today.com/health/striking-photo-shows-all-bacteria-8-year-olds-hand-t25096

NBDY negative regulator of P-body association Homo sapiens (human) – Gene – NCBI

August 18, 2018

NBDY negative regulator of P-body association [Homo sapiens (human)] – Gene – NCBI
https://www.ncbi.nlm.nih.gov/gene/550643

Modeling RNA Secondary Structure with Sequence Comparison and Experimental Mapping Data: Biophysical Journal

August 18, 2018

Modeling RNA Secondary Structure with Sequence Comparison &
Experimental Mapping Data
https://www.Cell.com/biophysj/fulltext/S0006-3495(17)30689-6 combines TurboFold sec. structure prediction w/ results of SHAPE assays

Zhen Tan
Gaurav Sharma
David H. Mathews

Open Archive Published:July 20, 2017
DOI:https://doi.org/10.1016/j.bpj.2017.06.039

The creation and selection of mutations resistant to a gene drive over multiple generations in the malaria mosquito

June 29, 2018

Creation & selection of mutations resistant to a #GeneDrive over mult. generations in the malaria mosquito
http://journals.PLoS.org/plosgenetics/article?id=10.1371/journal.pgen.1007039 Indels created by #NHEJ-based repair of DS breaks give rise to resistance (probably resulting from mis-matches due to
micro-homologies near breakpts)

The creation and selection of mutations resistant to a gene drive over multiple generations in the malaria mosquito

June 29, 2018

Creation & selection of mutations resistant to a #GeneDrive over mult. generations in the malaria mosquito
http://journals.PLoS.org/plosgenetics/article?id=10.1371/journal.pgen.1007039 Indels created by #NHEJ-based repair of DS breaks give rise to resistance (probably resulting from mis-matches due to
micro-homologies near breakpts)