Posts Tagged ‘gg’

Personalized and graph genomes reveal missing signal in epigenomic data

June 14, 2020

Personalized and graph genomes reveal missing signal in epigenomic data Cristian Groza, Tony Kwan, Nicole Soranzo, Tomi Pastinen & Guillaume Bourque Genome Biology volume 21, Article number: 124 (2020)

QT:{{ “Using permissive cutoffs, modified reference genomes are found to alter approximately 1% of peak calls while de novo assembled genomes alter up to 5% of peaks.” }}

biorxiv pre-prints can have PMIDs

June 13, 2020

https://www.nlm.nih.gov/news/Preprint_Pilot.html

facial recognition debate

June 11, 2020

A Case for Banning Facial Recognition

https://www.nytimes.com/2020/06/09/technology/facial-recognition-software.html

sequencing of Dead Sea Scrolls

June 6, 2020

https://www.sciencedirect.com/science/article/pii/S0092867420305523
Illuminating Genetic Mysteries of the Dead Sea Scrolls

host-viral infection maps from sc-rna seq with a computational framework

June 2, 2020

Host-Viral Infection Maps Reveal Signatures of Severe COVID-19 Patients

https://www.sciencedirect.com/science/article/pii/S0092867420305687

host-viral infection maps from sc-rna seq with a computational framework

June 2, 2020

https://www.sciencedirect.com/science/article/pii/S0092867420305687

Mapping and characterization of structural variation in 17,795 human genomes

May 28, 2020

https://www.nature.com/articles/s41586-020-2371-0
think allele frequencies are publicly available

Regulatory and Ethics Perspective on COVID-19 Data Sharing

May 8, 2020

https://www.ga4gh.org/news/regulatory-and-ethics-response-to-the-covid-19-pandemic

Apple now says it’s ok Re: properly cleaning iphones & laptops

May 4, 2020

Below is from the guardian:

https://www.theguardian.com/world/live/2020/mar/10/coronavirus-update-latest-italy-shutdown-lockdown-who-pandemic-outbreak-quarantine-uk-cases-usa-america-australia-live-news-updates?page=with:block-5e6792818f08c2df6d276b47#block-5e6792818f08c2df6d276b47

contact tracing

April 23, 2020

MIT contact tracing:
http://news.mit.edu/2020/bluetooth-covid-19-contact-tracing-0409