Posts Tagged ‘cbb752’

Tweets summarizing the last decade of my Biomedical Data Science class

June 22, 2026

Made this compilation of tweets, summarizing the evolution of my course over the past decade.

2016
https://x.com/MarkGerstein/status/761584298029903873

2017
https://x.com/MarkGerstein/status/821543863752028161

2018
https://x.com/MarkGerstein/status/953834840549445632

2019
https://x.com/MarkGerstein/status/1100227956855767050

2020
https://x.com/MarkGerstein/status/1218000993234964486

2021
https://x.com/MarkGerstein/status/1358997001107615746
https://x.com/MarkGerstein/status/1446302980895031298

2022
https://x.com/MarkGerstein/status/1507927389526929410

2024
https://x.com/MarkGerstein/status/1753960514751791428

2025
https://x.com/MarkGerstein/status/1931169517557731369
https://bsky.app/profile/markgerstein.bsky.social/post/3lqyb57puhc2g

2026
https://x.com/MarkGerstein/status/2067446703238656164
https://bsky.app/profile/markgerstein.bsky.social/post/3mojuuaxnkc26

Applied Linear Regression, 4th Edition | Wiley

June 21, 2026

https://www.stat.purdue.edu/~qfsong/teaching/525/book/Weisberg-Applied-Linear-Regression-Wiley.pdf $0

https://www.amazon.com/Applied-Linear-Regression-Probability-Statistics-ebook/dp/B00GY2UPAS/ref=tmm_kin_swatch_0 $130 Kindle textbook

https://www.wiley.com/en-br/shop/general-introductory-statistics/applied-linear-regression-4th-edition-p-9781118386088 $162

Textbook for Yale S&DS 3120 Linear Models

Tweets summarizing the last few years of Biomedical Data Science

June 20, 2026

2016
https://x.com/MarkGerstein/status/761584298029903873

2017
https://x.com/MarkGerstein/status/821543863752028161

2018
https://x.com/MarkGerstein/status/953834840549445632

2019
https://x.com/MarkGerstein/status/1100227956855767050

2020
https://x.com/MarkGerstein/status/1218000993234964486

2021
https://x.com/MarkGerstein/status/1358997001107615746
https://x.com/MarkGerstein/status/1446302980895031298

2022
https://x.com/MarkGerstein/status/1507927389526929410

2024
https://x.com/MarkGerstein/status/1753960514751791428

2025
https://x.com/MarkGerstein/status/1931169517557731369

2026
https://x.com/MarkGerstein/status/2067446703238656164

Colleges Are Building A.I. Degrees, Hoping Students Will Come

June 14, 2026

A.I. Degree Programs Surge as Colleges Seek Students and Relevance – The New York Times
https://www.nytimes.com/2026/06/08/us/ai-college-degrees.html

How A.I. Killed Student Writing (and Revived It) – The New York Times

May 16, 2026

https://www.nytimes.com/2026/04/30/us/ai-students-cheating-homework-classrooms.html QT:{{” Instead, in a rapid shift, teachers are requiring students to write inside the classroom, where they can be observed. Assignments have changed too, with some educators prompting students to reflect on their personal reactions to what they’ve learned and read — the type of writing that A.I. struggles to credibly produce. “}}

Transformer youtube video

March 6, 2026

youtube links to the transformer video that is helpful for
understanding the transformer:

https://www.youtube.com/watch?v=wjZofJX0v4M
https://www.youtube.com/watch?v=eMlx5fFNoYc

3Blue1Brown. (2024, April 1). Transformers, the tech behind LLMs | Deep Learning Chapter 5 [Video]. YouTube.
https://www.youtube.com/watch?v=wjZofJX0v4M

Attention in transformers, step-by-step | Deep Learning Chapter 6

MCB111 Mathematics in Biology

February 22, 2026

http://mcb111.org/w06/w06-lecture.html
Has some nice textbook downloads – e.g.
http://mcb111.org/w06/KollerFriedman.pdf

QT:{{”
There are many good books to learn about probabilistic models. “Probabilistic graphical models: principles and techniques” (by Koller & Friedman) is a comprehensive source about more general probabilistic models than the one we are going to study here.
“}}
Subset of chap 7 focuses on GMRF

NYTimes: A.I. Is Coming to Class. These Professors Want to Ease Your Worries.

February 14, 2026

https://www.nytimes.com/2026/01/17/nyregion/ai-college-classes.html

UW-Madison BMI/CS 776 Advanced Bioinformatics

February 14, 2026

course website
https://www.biostat.wisc.edu/bmi776/
and https://www.biostat.wisc.edu/bmi776/syllabus.html

canvas for intro bioinformatics. This was the previous website in 2017, https://www.biostat.wisc.edu/bmi576/syllabus.html

CourseTable

January 4, 2026

https://coursetable.com/catalog?selectSortBy=overall&searchText=s%26ds&sortOrder=desc