Archive for the 'SciLit' Category

Pedestrian dynamics at the running of the bulls evidence an inaccessible region in the fundamental diagram | PNAS

February 12, 2022

https://www.pnas.org/content/118/50/e2107827118

science

January 29, 2022

eQTLs paper is out in Nature Genetics:

Zeng, B., Bendl, J., Kosoy, R. et al. [Panos R] Multi-ancestry eQTL meta-analysis of human brain identifies candidate causal variants for brain-related traits. Nat Genet (2022).
https://doi.org/10.1038/s41588-021-00987-9

High-performance brain-to-text communication via handwriting | Nature

January 10, 2022

https://www.nature.com/articles/s41586-021-03506-2

The power of genetic diversity in genome-wide association studies of lipids | Nature

January 10, 2022

https://www.nature.com/articles/s41586-021-04064-3

some focus on its main method
MR-MEGA
https://academic.oup.com/hmg/article/26/18/3639/3976569

science

January 8, 2022

Published: 05 January 2022
Decoding gene regulation in the fly brain
Jasper Janssens, Sara Aibar, Ibrahim Ihsan Taskiran, Joy N. Ismail, Alicia Estacio Gomez, Gabriel Aughey, Katina I. Spanier, Florian V. De Rop, Carmen Bravo González-Blas, Marc Dionne, Krista Grimes, Xiao Jiang Quan, Dafni Papasokrati, Gert Hulselmans, Samira Makhzami, Maxime De Waegeneer, Valerie Christiaens, Tony Southall & Stein Aerts Nature (2022)

Nature paper today on Fly brain GRNs, https://doi.org/10.1038/s41586-021-04262-z

Some integrative analyses might be useful…

JCVI-syn3.0 – A synthetic genome stripped bare!

January 7, 2022

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4879981/

De novo protein design by deep network hallucination

January 5, 2022

https://www.nature.com/articles/s41586-021-04184-w

Anishchenko, Ivan, et al. “De novo protein design by deep network hallucination.” Nature (2021): 1-6.

Understanding adversarial examples requires a theory of artefacts for deep learning | Nature Machine Intelligence

January 2, 2022

https://www.nature.com/articles/s42256-020-00266-y

Why there is no such thing as a healthy diet that works for everyone | New Scientist

December 18, 2021

An interesting paper with implications for personalized nutrition, suggested to me by
@DrGarrettAsh1
https://link.springer.com/article/10.1007%2Fs13300-021-01174-z Gut Microbiome Activity Contributes to Prediction of Individual Variation in Glycemic Response in Adults

Represents an update to “Personalized Nutrition by Prediction of Glycemic Responses” from the
@segal_eran
lab (https://cell.com/fulltext/S0092-8674(15)01481-6)
cell.com
Personalized Nutrition by Prediction of Glycemic Responses

Also, I felt this easy to read
@NewScientist
overview was quite relevant to these works & put them into a larger
context https://newscientist.com/article/mg24732990-600-why-there-is-no-such-thing-as-a-healthy-diet-that-works-for-everyone/ Why there is no such thing as a healthy diet that works for everyone

Mapping the human genetic architecture of COVID-19 | Nature

December 16, 2021

https://www.nature.com/articles/s41586-021-03767-x