Posts Tagged ‘encode’

« Older posts
Newer posts »

FYI: Another Encode Commentary Paper

August 4, 2013

Mattick & Dinger
The extent of functionality in the human genome
http://www.thehugojournal.com/content/7/1/2/

Posted in SciLit | Leave a Comment »
Tags: ,

Massively parallel in vivo enhancer assay reveals that highly local features determine the cis-regulatory function of ChIP-seq peaks

July 18, 2013

http://www.pnas.org/content/110/29/11952

Posted in SciLit | Leave a Comment »
Tags:

Data Sharing, Embargo, and Big Science | MassGenomics

June 29, 2013

An interesting blog post on data release by consortia including ENCODE. http://massgenomics.org/2013/06/data-sharing-embargo.html

Posted in - | Leave a Comment »
Tags: ,

Paper Integrative analysis of C. elegans modENCODE ChIP-seq data sets to infer gene regulatory interactions

June 29, 2013

Genome Research
http://genome.cshlp.org/content/23/6/941.full?rss=1
Appears to use much of the existing modencode data

Posted in SciLit | Leave a Comment »
Tags: ,

BioTechniques – Up In The Sky! It’s Super-Enhancers

June 17, 2013

http://www.biotechniques.com/news/Up-In-The-Sky-Its-Super-Enhancers/biotechniques-343598.html#.Ub59JPaG1A9

Posted in x78qt | Leave a Comment »
Tags: , ,

Comment on “Evidence of Abundant Purifying Selection in Humans for Recently Acquired Regulatory Functions ”

May 18, 2013

http://www.sciencemag.org/content/340/6133/682.1.full

Posted in SciLit | Leave a Comment »
Tags: , , ,

Flesh-Eating Plant Cleaned Junk From Its Minimalist Genome – Phenomena: Not Exactly Rocket Science

May 13, 2013

http://phenomena.nationalgeographic.com/2013/05/12/flesh-eating-plant-cleaned-junk-minimalist-genome/

Posted in PopSci | Leave a Comment »
Tags: ,

On the immortality of television sets: “function” in the human genome according to the evolution-free g ospel of ENCODE

March 3, 2013

http://gbe.oxfordjournals.org/content/early/2013/02/20/gbe.evt028.abstracthttp://www.ncbi.nlm.nih.gov/pubmed/23431001

Posted in SciLit | Leave a Comment »
Tags: ,

Mike’s Fourth Try: My thoughts on the immortality of television sets

March 2, 2013

http://blog.mlin.net/2013/02/my-thoughts-on-immortality-of.html

Posted in - | Leave a Comment »
Tags: ,

Comment on “Evidence of Abundant and Purifying Selection in Humans for Recently Acquired Regulatory Functions ”

March 2, 2013

http://arxiv.org/ftp/arxiv/papers/1212/1212.3076.pdf

Posted in SciLit | Leave a Comment »
Tags: ,

« Older posts
Newer posts »