Posts Tagged ‘spatial’

A computational pipeline for spatial mechano-transcriptomics | Nature Methods

September 7, 2025

https://www.nature.com/articles/s41592-025-02618-1

Hallou, A., He, R., Simons, B. D., & Dumitrascu, B. (2025). A computational pipeline for spatial mechano-transcriptomics. Nature Methods. https://doi.org/10.1038/s41592-025-02618-1

Reviews:
https://www.nature.com/articles/s41580-023-00583-1#Sec35
(difficult to follow)

Combining with Spatial transcriptomics:
https://www.nature.com/articles/s41592-025-02618-1
(new thing)

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Inferring neuron-neuron communications from single-cell transcriptomics through NeuronChat | Nature Communications

March 23, 2025

https://www.nature.com/articles/s41467-023-36800-w

DHG suggestion

Zhao, W., Johnston, K. G., Ren, H., Xu, X., & Nie, Q. (2023). Inferring neuron-neuron communications from single-cell
transcriptomics through NeuronChat. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-36800-w

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