correlated noise in TF co-association / FFLs

March 9, 2013

http://dx.doi.org/10.1016/j.bpj.2013.01.033

Cross Talk and Interference Enhance Information Capacity of a Signaling Pathway Sahand Hormoz
QT:”
A recurring motif in gene regulatory networks is transcription factors (TFs) that regulate each other and then bind to overlapping sites on DNA, where they interact and synergistically control transcription of a target gene. Here, we suggest that this motif maximizes information flow in a noisy network. Gene expression is an inherently noisy process due to thermal fluctuations and the small number of molecules involved. A consequence of multiple TFs interacting at overlapping binding sites is that their binding noise becomes correlated. Using concepts from information theory, we show that in general a signaling pathway transmits more information if 1), noise of one input is correlated with that of the other; and 2), input signals are not chosen independently.

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