Posts Tagged ‘cancer’

Why Some Doctors Say There Are Cancers That Shouldn’t Be Treated – The New York Times

December 14, 2025

https://www.nytimes.com/2025/12/08/health/cancer-young-people-deaths.html

The world is making impressive progress averting cancer

August 15, 2025

https://www.economist.com/briefing/2025/07/17/the-world-is-making-impressive-progress-averting-cancer the war on cancer economist

Tumour evolution and microenvironment interactions in 2D and 3D space | Nature

November 10, 2024

https://www.nature.com/articles/s41586-024-08087-4

Mo, C., Liu, J., Chen, S., Storrs, E., Da Costa, A. L. N. T., Houston, A., Wendl, M. C., Jayasinghe, R. G., Iglesia, M. D., Ma, C., Herndon, J. M., Southard-Smith, A. N., Liu, X., Mudd, J., Karpova, A., Shinkle, A., Goedegebuure, S. P., Abdelzaher, A. T. M. A., Bo, P., . . . Ding, L. (2024). Tumour evolution and microenvironment interactions in 2D and 3D space. Nature, 634(8036), 1178–1186.
https://doi.org/10.1038/s41586-024-08087-4

MET500

October 30, 2024

https://met500.med.umich.edu/

useful for metastatic cancers

Invitae genetic testing

June 6, 2022

https://www.invitae.com/en/providers/test-catalog/test-01101

Hartwig

April 23, 2022

the marker paper of the Hartwig Medical Foundation paper.

Pan-cancer whole-genome analyses of metastatic solid tumours https://www.nature.com/articles/s41586-019-1689-y
Peter Priestley, Jonathan Baber, Martijn P. Lolkema, Neeltje Steeghs, Ewart de Bruijn, Charles Shale, Korneel Duyvesteyn, Susan Haidari, Arne van Hoeck, Wendy Onstenk, Paul Roepman, Mircea Voda, Haiko J. Bloemendal, Vivianne C. G. Tjan-Heijnen, Carla M. L. van Herpen, Mariette Labots, Petronella O. Witteveen, Egbert F. Smit, Stefan Sleijfer, Emile E. Voest & Edwin Cuppen
Nature volume 575, pages
210–216 (2019)

There have been numerous follow-up papers since.

Also, the Glioma Longitudinal Analysis (GLASS) Consortium datasets, which are publicly accessible via www.synapse.org/glass.
The first marker paper is here:
https://www.nature.com/articles/s41586-019-1775-1.

uniformly processed and annotated tumor single-cell rna-seq data of > 2M cells

August 9, 2020

http://tisch.comp-genomics.org/home/

Cancer Genomics and Precision Medicine < Yale Cancer Center

June 2, 2020

https://www.dropbox.com/s/759dkp3l2alnkna/6a83d77e-30de-4b41-81b3-dc91c5b63d4a.Interview-at-Yale-Cancer-Center.x57k.mp4?dl=0

https://www.yalecancercenter.org/media-player/4956/

Somatic evolution and global expansion of an ancient transmissible cancer lineage | Science

April 14, 2020

Adrian Baez-Ortega1, Kevin Gori1,*, Andrea Strakova1,*, Janice L. Allen2, Karen M. Allum3, Leontine Bansse-Issa4, …. Michael R. Stratton62, Ludmil B. Alexandrov63, Iñigo Martincorena62, Elizabeth P. Murchison1,†

Science 02 Aug 2019:
Vol. 365, Issue 6452, eaau9923
DOI: 10.1126/science.aau9923

https://science.sciencemag.org/content/365/6452/eaau9923

Nongenic cancer-risk SNPs affect oncogenes, tumour-suppressor genes, and immune function

February 8, 2020

https://www.nature.com/articles/s41416-019-0614-3