http://www.annualreviews.org/doi/abs/10.1146/annurev-genom-090413-025448
Posts Tagged ‘dw’
Lessons from modENCODE
July 11, 2015Publication delays at PLOS and 3,475 other journals
July 6, 2015#Publication delays at PLOS & 3,475 other[s] by @dhimmel http://blog.dhimmel.com/plos-and-publishing-delays Perhaps journals should provide on-time stats as airlines do
Similarity network fusion for aggregating data types on a genomic scale : Nature Methods : Nature Publishing Group
June 1, 2015Similarity #network fusion for aggregating data types http://www.nature.com/nmeth/journal/v11/n3/full/nmeth.2810.html Combines mRNA, miRNA & gene fusions to classify cancer subtypes
http://compbio.cs.toronto.edu/SNF/SNF
markov logic network from KDD 2014, might be good for netessay
August 31, 2014[[DW: very large-scale models (vs. VLSI): markov logic network on customer networks, Innovation Award Talk by Pedro Domingos, KDD 2014 ]]
http://homes.cs.washington.edu/~pedrod/803
also, it has biological applications like:
Markov Logic Networks in the Analysis of Genetic Data
https://www.systemsbiology.org/markov-logic-networks-analysis-genetic-data
Dr Fenyo in NYU Proteomic talks
August 31, 2014paper on cancer driver genes in RECOMB 2014
April 6, 2014paper from RECOMB 2014 might be interesting to you, which uses
hitting time in random walk to identify cancer drivers.
http://link.springer.com/chapter/10.1007%2F978-3-319-05269-4_23
HIT.nDRIVE: Multi-Driver Gene Prioritization based on Hitting Time
Raunak Shrestha, Ermin Hodzic, Jake Yeung, Kendric Wang, Thomas
Sauerwald, Phuong Dao, Shawn Anderson, Himisha Beltran, Mark A. Rubin,
Colin Collins, Gholamreza Haffari and S. Cenk Sahinalp.
linkstream2 microblog 