1000G v disease variants
http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.1003382
Posts Tagged ‘from’
amino acid changes in 1000 Genomes Project Thornton Lab
June 23, 2014RNAseq alignment and mapping
June 20, 2014The TCGA consortium has set up a test of aligner (10
aligners)/quantification (5 methods) sensitivity for RNA-seq quantification. The combinations they tried are available as a virtual machine at:
cancer mutation rates versus chromatin
June 14, 2014Chromatin organization is a major influence on regional mutation rates in human cancer cells
Benjamin Schuster-Böckler & Ben Lehner
http://www.nature.com/nature/journal/vaop/ncurrent/abs/nature11273.html
GDoc Track Changes
June 14, 2014Track-changes in #GDocs, plug-in that provides some functionality. However, wish #Google just had this built-in.
https://chrome.google.com/webstore/detail/track-changes/pgjeblaieehjmmahlikmifaggjckpcnp?hl=en
What You Learn in Your 40s – NYTimes.com
June 14, 2014Multiscale representation of genomic signals : Nature Methods : Nature Publishing Group
June 14, 2014Interesting but addressing mappability issue is key! Might want to also use a non-analytic stat test….
Compared to wavelets, non-independence betw. scales, perhaps key for allowing pruning.
Multiscale representation of #genomic signals. Fold changes & peaks at different scales; better expression prediction
http://www.nature.com/nmeth/journal/v11/n6/full/nmeth.2924.html
linkstream2 microblog 