Pavlidis mentions: …Multifunctional Genes…
http://www.plosone.org/article/info%253Adoi%252F10.1371%252Fjournal.pone.0017258 … hubbiness predicts these better than more complex methods #ismb #afp14
Posts Tagged ‘networks’
PLOS ONE: The Impact of Multifunctional Genes on “Guilt by Association” Analysis
July 12, 2014“An information-theoretic framework for resolving community structure in complex networks.” Proceedings of the National Academy of Sciences
June 12, 2014Rosvall, Martin, and Carl T. Bergstrom. “An information-theoretic framework for resolving community structure in complex networks.” Proceedings of the National Academy of Sciences 104.18 (2007): 7327-7331.
Info-theoretic framework for… community structure in complex #networks. Compression v modularity, former better?
http://www.pnas.org/content/104/18/7327.short
Inferring Cellular Networks Using Probabilistic Graphical Models
May 26, 2014Inferring… #Networks Using Probabilistic Graphical Models. Nice intro to #Bayesian methods, useful for #teaching
http://www.sciencemag.org/content/303/5659/799.abs
Citi Bike Rides: September 17th & 18th, 2013 on Vimeo
April 7, 2014Citi #Bike Rides 9/17/2013. Great #visualization of daily #network dynamics. Neat if applicable to cellular networks
http://vimeo.com/89305412
PARADIGM-SHIFT predicts the function of mutations in multiple cancers using pathway impact analysis
March 3, 2014PARADIGM-SHIFT predicts… function of mutations in… #cancers using pathway[s]. #Network-based gene prioritization
http://bioinformatics.oxfordjournals.org/content/28/18/i640
Hierarchy is Good. Hierarchy is Essential. And Less Isn’t Always Better | LinkedIn
January 21, 2014@mims2m:
Weekend read: Why you need middle management, you feckless layabout
Hierarchy is good: Nice argument that hierarchies are essential in any #social setting
http://www.linkedin.com/today/post/article/20140112221140-15893932-hierarchy-is-good-hierarchy-is-essential-and-less-isn-t-always-better HT @Chris_Gammell @mims (1/2)
.@Chris_Gammell @mims Perhaps related to middle managers being fundamental for info flow in molecular #networks
http://www.ncbi.nlm.nih.gov/pubmed/20351254 (2/2)
BioLayout
January 4, 2014QT:{{”
BioLayout Express3D has been specifically designed for visualization, clustering, exploration and analysis of very large network graphs in two- and three-dimensional space derived primarily, but not
exclusively, from biological data.
“}}
http://www.biolayout.org
Researchers Draw Romantic Insights From Maps of Facebook Networks – NYTimes.com
December 13, 2013Romantic Insights From Maps of Facebook #Networks: Many mutual friends don’t necessarily indicate a good match
http://bits.blogs.nytimes.com/2013/10/28/spotting-romantic-relationships-on-facebook
Stanford Large Network Dataset Collection
December 9, 2013.@randal_olson @thatdnaguy Lots of interesting #network datasets available from http://snap.stanford.edu/data . Thanks for pointing out this site!
http://snap.stanford.edu/data
linkstream2 microblog 