Archive for the 'SciLit' Category
bioarxiv paper on Golden State Killer
February 2, 2019The effects of death and post-mortem cold ischemia on human tissue transcriptomes | Nature Communications
February 2, 2019Changes in gene activity may one day reveal…time of death
https://www.ScienceMag.org/news/2018/02/changes-gene-activity-may-one-day-reveal-time-death-crime-victims Discusses paper by @RodericGuigo (“Effects of death & post-mortem cold ischemia on….#transcriptomes,”
https://www.Nature.com/articles/s41467-017-02772-x). Obvious forensic interest but maybe a #privacy angle as well
Changes in gene activity may one day reveal the time of death for crime victims
Artificial intelligence turns brain activity into speech
January 23, 2019Human genome-wide measurement of drug-responsive regulatory activity | Nature Communications
January 23, 2019https://www.nature.com/articles/s41467-018-07607-x
Whole-genome STARR-seq
Human genome-wide measurement of drug-responsive regulatory activity Graham D. Johnson, Alejandro Barrera, Ian C. McDowell, Anthony M. D’Ippolito, William H. Majoros, Christopher M. Vockley, Xingyan Wang, Andrew S. Allen & Timothy E. Reddy
Nature Communications volume 9, Article number: 5317 (2018)
Accurate classification of BRCA1 variants with saturation genome editing. – PubMed – NCBI
January 23, 2019https://www.ncbi.nlm.nih.gov/pubmed/30209399
Nature. 2018 Oct;562(7726):217-222. doi: 10.1038/s41586-018-0461-z. Epub 2018 Sep 12.
Accurate classification of BRCA1 variants with saturation genome editing. Findlay GM1, Daza RM1, Martin B1, Zhang MD1, Leith AP1, Gasperini M1, Janizek JD1, Huang X1, Starita LM2,3, Shendure J4,5,6.
Confounding: What it is and how to deal with it – ScienceDirect
January 13, 2019Productivity and influence in bioinformatics: A bibliometric analysis using PubMed central
December 28, 2018https://onlinelibrary.wiley.com/doi/full/10.1002/asi.22970
QT:{{”
Appendix shows the top 20 most highly cited authors based on 546,245 citations from PubMed Central. In all three periods, M. Gerstein, a professor in computational biology and bioinformatics at Yale University, is
both the most highly cited and productive author in the first author category.
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Flexible statistical methods for estimating and testing effects in genomic studies with multiple conditions
December 25, 2018seems to be better for eQTLs
https://www.nature.com/articles/s41588-018-0268-8
linkstream2 microblog 