Phylomemetics—Evolutionary Analysis beyond the Gene
http://www.plosbiology.org/article/info%3Adoi%2F10.1371%2Fjournal.pbio.1001069 #Phylogenetics for texts, languages & artifacts (w/ recoding)
Archive for the 'SciLit' Category
Phylomemetics—Evolutionary Analysis beyond the Gene
September 21, 2014BoxPlotR: a web tool for generation of box plots
September 21, 2014They published a paper on a web tool to generate box plots !! http://www.nature.com/nmeth/journal/v11/n2/full/nmeth.2811.html QT:{{”
Despite the obvious advantages of the box plot for simultaneous representation of data set and statistical parameters, this method is not in common use, in part because few available software tools allow the facile generation of box plots. For example, the standard spreadsheet tool Excel is unable to generate box plots.
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M.S. and J.W. conceived of the box plot tool
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Related:
http://bioinformatics.oxfordjournals.org/content/early/2014/01/21/bioinformatics.btu038.abstract
PLOS Computational Biology: Ten Simple Rules of Live Tweeting at Scientific Conferences
September 19, 201410… Rules of Live Tweeting at Sci #Conferences by @eperlste http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.1003789 Great list but no mention of #crowdsourced note taking
Is ecology explaining less and less?
September 15, 2014Is #ecology explaining less & less? http://news.sciencemag.org/biology/2014/08/ecology-explaining-less-and-less Over 100yr & 18k papers: more #pvalues but falling <r2>. What’s P for this trend?
Biostatistics: iCluster | Memorial Sloan Kettering Cancer Center
September 10, 2014simultaneously clustering of cancer data across data types, in a sense related to orthoclust
http://www.mskcc.org/research/epidemiology-biostatistics/biostatistics/icluster
PLOS Computational Biology: Waste Not, Want Not: Why Rarefying Microbiome Data Is Inadmissible
September 10, 2014Constructing structural networks of signaling pathways on the proteome scale
September 6, 2014Structural networks of signaling pathways
http://www.sciencedirect.com/science/article/pii/S0959440X1200070X Prism on IL10 #networks, mapping on Cosmic, disrupting mutations as drivers
What Can Article-Level Metrics Do for You?
September 1, 2014What Can Article-Level Metrics Do for You
http://www.plosbiology.org/article/info%3Adoi%2F10.1371%2Fjournal.pbio.1001687 Wide distribution of #cites for @PLOSBiology papers; median 19 but 10% >50
BMC Bioinformatics | Full text | BicSPAM: flexible biclustering using sequential patterns
August 31, 2014Related to BIP KDD talk, dealing with overlapping biclusters http://www.biomedcentral.com/1471-2105/15/130
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