Circadian #Enhancers Coordinate… Rhythmic… Transcription http://www.cell.com/cell/abstract/S0092-8674%2814%2901310-5
Periodicity helps find #eRNAs/enhancers & their targets
Posts Tagged ‘from’
Analyses of allele-specific gene expression in highly divergent mouse crosses identifies pervasive allelic imbalance : Nature Genetics : Nature Publishing Group
March 29, 2015http://www.nature.com/ng/journal/vaop/ncurrent/full/ng.3222.html
Nat Genet. 2015 Mar 2. doi: 10.1038/ng.3222. [Epub ahead of print]
Analyses of allele-specific gene expression in highly divergent mouse crosses identifies pervasive allelic imbalance.
Crowley JJ1, Zhabotynsky V1, Sun W2, Huang S3, Pakatci IK3, Kim Y1, Wang JR3, Morgan AP4, Calaway JD4, Aylor DL1, Yun Z1, Bell TA4, Buus RJ4, Calaway ME4, Didion JP4, Gooch TJ4, Hansen SD4, Robinson NN4, Shaw GD4, Spence JS1, Quackenbush CR1, Barrick CJ1, Nonneman RJ1, Kim K5, Xenakis J5, Xie Y1,Valdar W6, Lenarcic AB1, Wang W3, Welsh CE3, Fu CP3, Zhang Z3, Holt J3, Guo Z3, Threadgill DW7, Tarantino LM8, Miller DR4, Zou F5, McMillan L3, Sullivan PF9, Pardo-Manuel de Villena F4.
http://www.nature.com/ng/journal/v47/n4/full/ng.3222.html
Carefully controlled allele expt – hets midway in expr betw homs for parents for 76pct (additive model) but 25pct hets diff. from parents
ASE in…divergent mouse crosses identifies pervasive allelic imbalance, 80%, w/ 60% closely following additive model
http://www.nature.com/ng/journal/vaop/ncurrent/full/ng.3222.html
Syntrophic exchange in synthetic microbial communities
March 28, 2015Syntrophic exchange in synthetic #microbial communities [& their evolution] http://www.pnas.org/content/111/20/E2149.abstract Trading metabolically costly amino acids
Reverse engineering of TLX oncogenic transcriptional networks identifies RUNX1 as tumor suppressor in T-ALL
March 27, 2015RUNX1 is most connected in TLX1 & 3 expr. net. It’s a tumor suppressor disabled by LOF mutations.
Rev. engineering…identifies RUNX1 as tumor suppressor in T-ALL http://www.nature.com/nm/journal/v18/n3/full/nm.2610.html It’s the most connected TF in the expression network
Nat Med. Author manuscript; available in PMC 2012 Sep 1.
Nat Med. 2012 Feb 26; 18(3): 436–440.
Published online 2012 Feb 26. doi: 10.1038/nm.2610
Giusy Della Gatta,1 Teresa Palomero,1,2 Arianne Perez-Garcia,1 Alberto Ambesi-Impiombato,1 Mukesh Bansal,3Zachary W. Carpenter,1 Kim De Keersmaecker,4,5 Xavier Sole,6,7 Luyao Xu,1 Elisabeth Paietta,8,9 Janis Racevskis,8,9Peter H Wiernik,8,9 Jacob M Rowe,10 Jules P Meijerink,11 Andrea Califano,1,3 and Adolfo A. Ferrando1,2,12
truecrypt fork
March 24, 2015Convergent transcriptional specializations in the brains of humans and song-learning birds
March 15, 2015Convergent…specializations in brains of humans & songbirds http://www.sciencemag.org/content/346/6215/1256846.long Both have matching expression patterns across regions
The pi moment of the century
March 15, 2015The pi moment of the century just occurred on the E Coast, USA: 3.14.15 9:26:53 (March 14, 2015 9:26:53 am ET)! via @bornalibran #PiDay2015
related to the scaling you like
March 13, 2015Statistical Basis for Predicting Technological Progress
http://trancik.scripts.mit.edu/home/data/
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0052669
Béla Nagy,
J. Doyne Farmer,
Quan M. Bui,
Jessika E. Trancik
Published: February 28, 2013
DOI: 10.1371/journal.pone.0052669
ResearchKit + HealthKit
March 10, 2015Contact CRM
March 10, 2015Main one:
http://www.evercontact.com/
auto-updating your gmail contacts by analyzing email signatures:
The other softwares related are:
1) Contactually
(https://www.contactually.com/for-individuals/tour/contact-management/) 2) Signusapp https://signusapp.wordpress.com/
