Posts Tagged ‘from_csds’

smart plugs for heating and light

December 9, 2016

https://www.hivehome.com/us

Genome-wide association study identifies 74 loci associated with educational attainment : Nature : Nature Publishing Group

May 21, 2016

GWAS identifies 74 loci associated w. educational attainment http://www.nature.com/nature/journal/vaop/ncurrent/full/nature17671.html Described in 3 pgs of main text & 146 pgs of supplement

http://www.nature.com/nature/journal/vaop/ncurrent/full/nature17671.html

BMC Genomics | Full text | Pseudogenes transcribed in breast invasive carcinoma show subtype-specific expression and ceRNA potential

July 31, 2015

[440 @GencodeGenes] #Pseudogenes transcribed in breast…carcinoma show subtype-specific expression & ceRNA potential http://www.biomedcentral.com/1471-2164/16/113

Oqtans: the RNA-seq workbench in the cloud for complete and reproducible quantitative transcriptome analysis. – PubMed – NCBI

July 21, 2015

http://Oqtans.org: RNAseq…in the cloud by @gxr http://bioinformatics.oxfordjournals.org/content/30/9/1300.long Distributing a tool in many ways: AMI, GIT, Galaxy workflow, &c
Nice illustration how to distribute a tool in many forms —

AMI, GIT, Galaxy workflow + more.

* Sreedharan et al. Oqtans: the RNA-seq workbench in the cloud for
complete and reproducible quantitative transcriptome analysis.

The authors describe an open source transcriptome analysis software
package, Oqtans. The package contains a variety of existing analysis
tools (from short-read alignment, transcript quantification and
expression analysis) assembled into a comprehensive workflow. The
package can be either run locally or as a virtual machine in the cloud
using the AWS. One innovative feature is the availability of comparing
the efficiency of the integrated tools on the same data set. Oqtans is
a highly modular software package that can be easily extended. It also
offers the possibility to create customized workflows based on the
integrated tools available.

Moore’s law is not that easy to follow anymore

July 16, 2015

http://thenextweb.com/insider/2015/07/16/intel-quietly-admits-that-its-struggling-with-moores-law/

het/hom

March 24, 2014

het/hom ratio = ~1.5
in the sequencing of many Asian individuals (Table 1)

http://www.nature.com/ng/journal/v43/n8/fig_tab/ng.872_T1.html

From
Extensive genomic and transcriptional diversity identified through massively parallel DNA and RNA sequencing of eighteen Korean individuals
Nature Genetics 43, 745-752 (2011) doi:10.1038/ng.872