Posts Tagged ‘fromemail’

Follow-up on error-controlled hypothesis generation

November 22, 2025

Chen, W., Jiang, Y., Noble, W. S., & Lu, Y. Y. (2025).
Error-controlled non-additive interaction discovery in machine learning models. Nature Machine Intelligence, 7(9), 1541–1554. https://doi.org/10.1038/s42256-025-01086-8

a few documents from our meeting

July 12, 2025

Green, J. L. (2014). Can bioinformed design promote healthy indoor ecosystems? Indoor Air, 24(2), 113–115.
https://doi.org/10.1111/ina.12090

https://onlinelibrary.wiley.com/doi/pdf/10.1111/ina.12090

Sundell, J., Levin, H., Nazaroff, W. W., Cain, W. S., Fisk, W. J., Grimsrud, D. T., Gyntelberg, F., Li, Y., Persily, A. K., Pickering, A. C., Samet, J. M., Spengler, J. D., Taylor, S. T., & Weschler, C. J. (2010). Ventilation rates and health: multidisciplinary review of the scientific literature. Indoor Air, 21(3), 191–204.
https://doi.org/10.1111/j.1600-0668.2010.00703.x

https://www.academia.edu/12925602/Ventilation_rates_and_health_multidisciplinary_review_of_the_scientific_literature QT:{{”
There is biological plausibility for an association of health outcomes with ventilation rates, although the literature does not provide clear evidence on particular agent(s) for the effects. Higher ventilation rates in offices, up to about 25 l/s per person, are associated with reduced prevalence of sick building syndrome (SBS) symptoms. “}}

a few documents from our meeting

July 12, 2025

Gilbert, J. A., & Hartmann, E. M. (2024). The indoors microbiome and human health. Nature Reviews Microbiology, 22(12), 742–755.
https://doi.org/10.1038/s41579-024-01077-3

An updated 2024 indoor microbiome and human health review from Nature Reviews Microbiology.

FYI:”The US wants a wearable for all. Experts say it won’t fix the health crisis”

July 5, 2025

https://www.digitaltrends.com/mobile/the-us-wants-a-wearable-for-all-experts-say-it-wont-fix-the-health-crisis/

AbbVie slides

July 3, 2025

https://pages.awscloud.com/rs/112-TZM-766/images/Abbvie_Molecule%20Design%20with%20ESM.pdf?version=1&trk=d8d1d9e7-95be-46b4-9ad0-53e67ac1ea52&sc_channel=el

these slides might be related to the event in this link:

https://aws.amazon.com/blogs/industries/highlights-from-the-2025-aws-life-sciences-symposiums-drug-discovery-track/

The ‘gene deserts’ unravelling the mysteries of disease

June 27, 2024

https://www.bbc.com/future/article/20240625-the-gene-deserts-unravelling-the-mysteries-of-disease

ICA applications on deconvolutions

May 17, 2024

Here are some links for ICA deconvolution on omics data:

https://bmcmedgenomics.biomedcentral.com/articles/10.1186/s12920-019-0578-4 https://urszulaczerwinska.github.io/UCzPhDThesis/deconica.html https://academic.oup.com/nar/article/49/9/e54/6146629
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6751789/
https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1008647

Offiicial Yale Copyright Policy

April 30, 2024

The official Yale copyright policy:
https://ventures.yale.edu/yale-university-copyright-policy

Here is an excerpt:

The University will own the copyright to works created (i) by staff members or postdoctoral fellows or postdoctoral associates in the course of their assigned duties of employment, (ii) by student employees in the course of their assigned duties of employment, including duties as teaching or research assistance, or (iii) by faculty members as part of an assigned task where the assignment explicitly states that the work will be owned by the University.

diff doc creation for latex files

April 16, 2024

software that simplifies document editing/creation.

latexdiff, which creates diff docs for latex files:
https://www.overleaf.com/learn/latex/Articles/Using_Latexdiff_For_Marking_Changes_To_Tex_Documents

Latexdiff is fairly simple and intuitive to use.

Building an early warning system for LLM-aided biological threat creation

April 9, 2024

https://openai.com/research/building-an-early-warning-system-for-llm-aided-biological-threat-creation