Posts Tagged ‘mixo’

From Lab to Launch: Eleven Faculty Innovators Recognized for Turning Research into Real-World Impact | Yale Ventures

November 23, 2025

https://ventures.yale.edu/news/lab-launch-eleven-faculty-innovators-recognized-turning-research-real-world-impact

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The 2025 Yale Faculty Innovation Awards honor academic founders whose startups—rooted in Yale research—are advancing breakthroughs in health, sustainability, and engineering.

Date: 11/20/2025
Yale University has recognized eleven faculty innovators with the 2025 Yale Faculty Innovation Awards for translating breakthrough research into ventures that address some of the world’s most pressing challenges. These academic founders are transforming discoveries made in Yale labs into technologies that improve human health, advance sustainability, and shape the future of science and society.

Spanning AI-powered drug discovery and precision health, novel therapeutics for neurodegenerative and autoimmune diseases, advanced materials and microLED engineering, and next-generation tools for molecular imaging and genomic privacy, this year’s awardees exemplify how Yale research drives real-world impact.

Advancing DNA analysis and privacy protection with cutting-edge data-science approaches.
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Remains of 3 Victims of 9/11 Are Identified From Minuscule Evidence – The New York Times

August 24, 2025

https://www.nytimes.com/2025/08/07/nyregion/sept-11-victims-remains-identified.html

ICA and the Real-Life Cocktail Party Problem | Towards Data Science

June 29, 2025

Ball, K. (2025, January 20). ICA and the Real-Life Cocktail Party Problem. Towards Data Science.
https://towardsdatascience.com/ica-and-the-real-life-cocktail-party-problem-6375ba35894b/

Verogen | The Future of Forensic Genomics and DNA Sequencing

April 15, 2025

https://verogen.com/

How Your Family Tree Could Catch a Killer | The New Yorker

March 13, 2025

The woman featured, CeCe Moore, is quite clever, going far beyond simply examining genealogical matches to track potential suspects.

parabon-nanolabs.com

https://www.newyorker.com/magazine/2021/11/22/how-your-family-tree-could-catch-a-killer

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Genealogists grew interested in genetics at the turn of the
millennium, when it became possible to analyze bits of information from the Y chromosome—known as Y-DNA—on a commercial scale. Because the Y chromosome is passed from father to son with little mutation, and because surnames historically were passed down the same way, it seemed worth exploring whether the confluence could be useful to researchers. In the late nineties, Bryan Sykes, an Oxford geneticist, persuaded forty-eight men who shared his surname to take Y-DNA tests. “Sykes” comes from a Middle English word meaning “spring” or “stream,” and the name was thought to have arisen separately among unrelated families that lived near various sources of water. But the genetics suggested that the men descended from a single ancestral line. “If this pattern is reproduced with other surnames, it may have important forensic and genealogical applications,” Sykes concluded.
Theoretically, researchers could use Y-DNA to establish the pedigree of a man with an unknown identity. Sykes made a similar case for mt-DNA, which is passed down on the maternal line, in a book titled “The Seven Daughters of Eve.”
….
The first step was to establish a DNA profile for the adoptee in a database like GEDmatch, to look for partial genetic matches with other users. The people linked with those matches were not always easy to identify; some users logged on without any personal information or, worse, under aliases. But, when the genealogists succeeded, they could trace back family trees until they identified common ancestors. Then they would reverse the process: starting from the common ancestors, they would build a complete tree of all the descendants, knowing that the adoptee’s parents had to be among them. The amount of DNA that the adoptee shared with matches in the database was a key clue to where he or she belonged in the larger tree; personal details, like birth dates and geography, could also provide clues.
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Talitrix Prison-Monitoring System Tracks Inmates Down to Their Heart Rate | WIRED

March 13, 2025

https://www.wired.com/story/prison-wristband-talitrix-tracking/

The study of ancient DNA is helping to solve modern crimes

November 2, 2024

v. related to plight + deconvolution

https://www.economist.com/science-and-technology/2024/10/23/the-study-of-ancient-dna-is-helping-to-solve-modern-crimes

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Dr Willerslev had been able to obtain SNPs from Meng’s trousers. Then came the task of trying to identify whom they could have come from. In 2023 a man called Philip Patrick Westh was arrested in connection with a kidnapping case in the same area; because of similarities between the cases, the police believed that he had killed Meng too (Mr Westh denies most of the accusations related to the kidnapping case and pleaded not guilty to the charge of killing Meng). To assess the probability that the genetic material from Meng’s trousers had come from Mr Westh, Dr Willerslev made use of a DNA database of ordinary, healthy Danes. If the SNPs found on the trousers were identical to those in Mr Westh’s DNA, went the logic, and enough of them were sufficiently rare variants, the probability that they did indeed come from Mr Westh went up. Dr Willerslev testified that this particular pattern of SNP variants would be at least one million times more likely to turn up if the sample included DNA from Mr Westh, or a close relative, than if it did not.

But identifying a suspect from SNPs is another matter. Degraded samples can be extremely complex to analyse, says Dr Simonsen, in particular if material from several people has been mixed together. There are no standardised forensic protocols for separating out those signals, nor for how to confidently calculate the probability that the DNA belongs to a suspect. That matters because the stakes are somewhat higher in a criminal case than in the study of mammoths and dodos. But, says Dr Simonsen, “We expect that nut to be cracked.” He hopes to learn from Dr Willerslev’s team and develop new forensic tools. The work has already started: in September, researchers from Aalborg University and the University of Copenhagen, with whom he
collaborates, published a paper describing an approach for doing identification calculations based on SNPs.

He is not the only one to see potential. An American company called Astrea Forensics has recently spun out from the palaeogenomics group at the University of California in Santa Cruz, to offer aDNA expertise to law enforcement. Their speciality is the nuclear DNA found within hair, which has long been considered too fragmented and scarce to be of any use.
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Mining proteins for crime scene clues

October 19, 2024

C&Amp;EN, C. W. S. T. (2023, March 25). Mining proteins for crime scene clues. Chemical & Engineering News.
https://cen.acs.org/analytical-chemistry/forensic-science/Mining-proteins-crime-scene-clues/100/i1

Your DNA Can Now Be Pulled From Thin Air. Privacy Experts Are Worried. – The New York Times

September 28, 2024

quite relevant to plight & deconvolution

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Over the last decade, wildlife researchers have refined techniques for recovering environmental DNA, or eDNA — trace amounts of genetic material that all living things leave behind….The eDNA technology is also used in wastewater surveillance systems to monitor Covid and other pathogens.

But all along, scientists using eDNA were quietly recovering gobs and gobs of human DNA. To them, it’s pollution, a sort of human genomic bycatch muddying their data. But what if someone set out to collect human eDNA on purpose?

New DNA collecting techniques are “like catnip” for law enforcement officials, says Erin Murphy, a law professor at the New York University School of Law who specializes in the use of new
technologies in the criminal legal system. The police have been quick to embrace unproven tools, like using DNA to create probability-based sketches of a suspect.

As a proof of concept in one of their experiments, the researchers scooped up a soda-can-size sample of water from a creek in St. Augustine, Fla. They then fed the genetic material from the sample through a nanopore sequencer, which allows researchers to read longer stretches of DNA. The one they used cost about $1000, is the size of a cigarette lighter and plugs into a laptop like a flash drive.

From the samples, the team recovered much more legible human DNA than they had anticipated. And as knowledge expands about human genetics, analysis of even limited samples can reveal a wealth of information. …

That highlights the possibility that law enforcement officials could use eDNA collected at crime scenes to incriminate people, even though wildlife ecologists who developed the techniques say the science isn’t mature enough for such purposes. Scientists have yet to pin down the fundamentals of eDNA, like how it travels through air or water or how it degrades over time. And nanopore sequencing — the technology that allowed Dr. Duffy’s team to find longer and more informative DNA fragments — still has a much higher error rate than older
technologies, meaning an unusual genetic signature that seems like a promising lead could be a red herring.
….

“There’s an imbalance in almost all systems of the world between what law enforcement is allowed to do, versus publicly funded research, versus private companies,” said Barbara Prainsack, a professor at the University of Vienna who studies the regulation of DNA technology in medicine and forensics.
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https://www.nytimes.com/2023/05/15/science/environmental-dna-ethics-privacy.html