https://medicine.yale.edu/news-article/how-to-train-a-biomedical-data-scientist/
Posts Tagged ‘cbb’
Secondary_appt Updated Handbook
October 17, 2021an updated graduate student handbook has been posted on the CS website. https://cpsc.yale.edu/sites/default/files/files/GRADHandbook%2021-22(3).pdf
Yale PhD stats broken down by program
March 1, 2018this public view of Yale PhD stats broken down by program:
https://public.tableau.com/profile/ecf5839#!/vizhome/shared/26RTFY27Q
DREM 2.0: Improved reconstruction of dynamic regulatory networks from time-series expression data | BMC Systems Biology | Full Text
April 8, 2016DREM…reconstruction of…regulatory #networks from time-series expression http://bmcsystbiol.biomedcentral.com/articles/10.1186/1752-0509-6-104 Classic approach using 3-level IO #HMMs
Bottomly to leave for Wellesley presidency | Yale Daily News
March 9, 2015Yale dep. provost from ’05 to ’07
http://yaledailynews.com/blog/2007/05/11/bottomly-to-leave-for-wellesley-presidency/
Dissertation regulations
March 7, 2015The Yale graduate school regulations governing dissertations includes a paragraph that indicates that only two dissertation committee members need Yale appointments:
QT:{{
“Registered doctoral candidates must have a principal adviser with an appointment on the Graduate School faculty. The Graduate School requires that each dissertation be read by at least three persons but not more than five, at least two of whom are ladder or ladder-track faculty members at Yale. All readers must hold the Ph.D. degree as well as a faculty position or be considered otherwise qualified to evaluate the dissertation…”
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http://www.yale.edu/printer/bulletin/htmlfiles/grad/policies-and-regulations.html#dissertation
MOOC URLs
August 24, 2013URLs for a couple of courses recommended on Coursera:
Parallel Programming – especially with GPUs (Wenmei Hwu, UIUC): https://class.coursera.org/hetero-2012-001/class
Machine Learning (Andrew Ng, Stanford):
https://class.coursera.org/ml-003/class
Potential Classes for an Undergraduate Major in Bioinformatics
August 5, 2013I list below a number of courses that I think should be
included/excluded from the undergrad bioinformatics program. This is based on a discussion with a student who did an undergraduate double major in CS and Biology.
The courses that I think essential for the program are:
– Algorithms, Data structures, Cell & Molecular biology, and Genetics
The courses that I think should be included in the program are:
– Discrete mathematics, Algorithms on strings, Computational complexity, Statistics, Data mining and Databases, Machine Learning, Biochemistry, Unix/Linux operating system, Scripting Languages (Perl and/or Python), and Scientific writing
The courses that I think might less important are:
– Computer architecture, Compiler theory, Circuit design, Inorganic chemistry, and Chemical engineering
Curious to get people’s thoughts on this. Feel free to comment or email me (http://contact.gerstein.info).
Potential Classes for an Undergraduate Major in Bioinformatics
August 4, 2013I list below a number of courses that I think should be
included/excluded from the undergrad bioinformatics program. This is based on a discussion with a student who did an undergraduate double major in CS and Biology.
The courses that I think essential for the program are:
-Algorithms, Data structure, Cell and Molecular biology, and Genetics
The courses that I think should be included in the program are:
-Discrete mathematics, Algorithms on strings, Computational
complexity, Statistics, Data mining and Databases, Machine Learning, Biochemistry, Unix/Linux operating system, Scripting Languages (Perl and/or Python), and Scientific wirtting
The courses that I think might less important are:
-Computer architecture, Compiler theory, Circuit design, Inorganic chemistry, and Chemical engineering
Curious to get people’s thoughts on this. Feel free to comment or email me.
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