Posts Tagged ‘from’

Another VAT!

May 9, 2014

Variant Association Tools for Quality Control and Analysis of Large-Scale Sequence and Genotyping Array Data

http://www.cell.com/ajhg/abstract/S0002-9297(14)00176-1

vs

http://papers.gersteinlab.org/papers/vat

Phevor Combines Multiple Biomedical Ontologies for Accurate Identification of Disease-Causing Alleles in Single Individuals and Small Nuclear Families

May 9, 2014

http://www.cell.com/ajhg/abstract/S0002-9297(14)00112-8

Atomdroid: A Computational Chemistry Tool for Mobile Platforms

May 2, 2014

http://pubs.acs.org/doi/abs/10.1021/ci2004219

Yale-UCL collaborative

May 2, 2014

This is the link to the student exchange program:
http://www.yale-ucl.org/ahs/yale_exchange_info.aspx

The student exchange is part of a wider collaboration scheme between Yale and UCL.

http://www.yale-ucl.org/index.aspx

Protein interaction network of alternatively spliced isoforms from brain links genetic risk factors for autism

April 27, 2014

Protein… #network of alternatively spliced isoforms from brain…: Half of the interactions from #splicing variants
http://www.nature.com/ncomms/2014/140411/ncomms4650/abs/ncomms4650.html

PLOS ONE: Burst of Young Retrogenes and Independent Retrogene Formation in Mammals

April 19, 2014

Burst of Young Retrogenes…in Mammals. Discusses much
retro-transposition ~40 Mya, relevant to proc. #pseudogenes
http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0005040

Also, ref #11 provides more detail on this.

cleanliness and godliness

April 19, 2014

from
http://support.apple.com/kb/ht3988

“How to disinfect the Apple internal or external keyboard, trackpad, and mouse… you should use Lysol Wipes or Clorox Kitchen Disinfecting wipes”

An example of this:

http://www.amazon.com/Clorox-Disinfecting-Wipes-105-Count-Canister/dp/B0036B89QC

However, this doesn’t include an ipad screen. For this, see: http://lifehacker.com/5665119/how-to-safely-disinfect-and-clean-your-gadgets

and the following products:

http://www.amazon.com/Klearscreen-iKlear-Apple-Polish-Kit/dp/B00078COKE and “recommended by Apple” Sanus Elements ELM104
http://store.apple.com/us/product/H6014LL/A

Encode-annotation interesting paper

April 14, 2014

recent publication from the Donnelly group comparing using GENCODE or Refeq annotation when predicting variants effects.
Choice of transcripts and software has a large effect on variant annotation
Genome Medicine 2014, 6:26 doi:10.1186/gm543

Processed pseudogenes acquired somatically during cancer development

April 12, 2014

http://www.nature.com/ncomms/2014/140409/ncomms4644/full/ncomms4644.html

Sex Determination Video

April 12, 2014

https://www.youtube.com/watch?v=kMWxuF9YW38#t=94