https://www.nature.com/articles/s41586-018-0409-3
QT:{{”
“… comprehensive genomic characterization of 27 strains of the common breast cancer cell line MCF7 uncovered rapid genetic
diversification. Similar results were obtained with multiple strains of 13 additional cell lines.
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Posts Tagged ‘fromemail’
New study finds cell line difference across labs
August 16, 2018genome-wide starr-seq + sources of experimental bias
August 12, 2018quite relevant
https://www.nature.com/articles/nmeth.4534
Resolving systematic errors in widely used enhancer activity assays in human cells
Felix Muerdter
, Łukasz M Boryń
, Ashley R Woodfin
, Christoph Neumayr
, Martina Rath
, Muhammad A Zabidi
, Michaela Pagani
, Vanja Haberle
, Tomáš Kazmar
, Rui R Catarino
, Katharina Schernhuber
, Cosmas D Arnold
& Alexander Stark
Nature Methods volume 15, pages141–149 (2018)
The Pudding – You will like this…
August 11, 2018text mining and privacy
August 4, 2018Don’t quote me: reverse identification of research participants in social media studies
John W. Ayers,
Theodore L. Caputi,
Camille Nebeker &
Mark Dredze
npj Digital Medicine
volume 1, Article number: 30 (2018)
Conference at Yale on R for Medicine
August 3, 2018R/Medicine 2018
http://r-medicine.com
About. The goal of the R/Medicine conference is to promote the use of the R programming environment and the R ecosystem in medical research and clinical practice.
The hackers teaching old DNA sequencers new tricks
August 2, 2018A pretty cool piece on nature about people hacking old Illumina GAII https://www.nature.com/articles/d41586-018-05769-8
GA4GH’s paper on data sharing
July 27, 2018Perspective | OPEN | Published: 23 July 2018
Responsible sharing of biomedical data and biospecimens via the “Automatable Discovery and Access Matrix” (ADA-M)
J. Patrick Woolley,
Emily Kirby,
Josh Leslie,
Francis Jeanson,
Moran N. Cabili,
Gregory Rushton,
James G. Hazard,
Vagelis Ladas,
Colin D. Veal,
Spencer J. Gibson,
Anne-Marie Tassé,
Stephanie O. M. Dyke,
Clara Gaff,
Adrian Thorogood,
Bartha Maria Knoppers,
John Wilbanks &
Anthony J. Brookes
npj Genomic Medicinevolume 3, Article number: 17 (2018) | Download Citation
new paper in Nature Genomic Medicine:
https://www.nature.com/articles/s41525-018-0057-4
old school mechanical flap display
July 27, 2018the flap display ….
the price is pretty steep even after the hefty discount
DNA by numbers
June 26, 2018https://www.forensicmag.com/article/2015/10/dna-numbers)
work related to DNA leakage in daily life
linkstream2 microblog 