https://academic.oup.com/bioinformatics/article/26/19/2458/229387
Archive for the 'SciLit' Category
Fast search of thousands of short-read sequencing experiments : Nature Biotechnology : Nature Research
November 5, 2017SEQSpark: A Complete Analysis Tool for Large-Scale Rare Variant Association Studies Using Whole-Genome and Exome Sequence Data: The American Journal of Human Genetics
November 5, 2017http://www.cell.com/ajhg/fulltext/S0002-9297(17)30235-5
Cell-free DNA Comprises an In Vivo Nucleosome Footprint that Informs Its Tissues-Of-Origin. – PubMed – NCBI
November 5, 2017CHiCAGO: robust detection of DNA looping interactions in Capture Hi-C data | Genome Biology | Full Text
November 5, 2017Obesity-associated variants within FTO form long-range functional connections with IRX3
November 5, 2017Comparative analysis of three-dimensional chromosomal architecture identifies a novel fetal hemoglobin regulatory element. – PubMed – NCBI
October 30, 2017Comparative…3D chromosomal architecture identifies a novel fetal Hb reg. element http://GenesDev.cshlp.org/content/31/16/1704.abstract #Pseudogene shifts v. promotor
Visualizing the molecular sociology at the HeLa cell nuclear periphery | Science
October 26, 2017http://science.sciencemag.org/content/351/6276/969.long
#Visualizing the molecular sociology [of complexes] at the HeLa cell nuclear periphery, w/ #CryoET at 10 Ang. res. http://science.ScienceMag.org/content/351/6276/969.long
Science. 2016 Feb 26;351(6276):969-72. doi: 10.1126/science.aad8857.
Visualizing the molecular sociology at the HeLa cell nuclear periphery.
Mahamid J1, Pfeffer S2, Schaffer M2, Villa E3, Danev R2, Cuellar LK2, Förster F2, Hyman AA4, Plitzko JM2, Baumeister W1.
GTEx paper
October 22, 2017Paper about what will be on eGTEx project:
https://www.nature.com/ng/journal/vaop/ncurrent/full/ng.3969.html
Gtex Nature
https://www.nature.com/nature/journal/v550/n7675/full/nature24267.html https://www.nature.com/nature/journal/v550/n7675/full/nature24265.html https://www.nature.com/nature/journal/v550/n7675/full/nature24041.html http://www.nature.com/nature/journal/v550/n7675/full/nature24277.html
German activities on RNA privacy
October 21, 2017http://www.mhumbert.com/publications/oakland17.pdf
Identifying Personal DNA Methylation Profiles by Genotype Inference
Michael Backes⇤, Pascal Berrang⇤, Matthias Bieg†, Roland Eils†‡, Carl Herrmann†‡, Mathias Humbert⇤, Irina Lehmann§
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