Posts Tagged ‘from’

Protein interaction network of alternatively spliced isoforms from brain links genetic risk factors for autism

April 27, 2014

Protein… #network of alternatively spliced isoforms from brain…: Half of the interactions from #splicing variants
http://www.nature.com/ncomms/2014/140411/ncomms4650/abs/ncomms4650.html

PLOS ONE: Burst of Young Retrogenes and Independent Retrogene Formation in Mammals

April 19, 2014

Burst of Young Retrogenes…in Mammals. Discusses much
retro-transposition ~40 Mya, relevant to proc. #pseudogenes
http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0005040

Also, ref #11 provides more detail on this.

cleanliness and godliness

April 19, 2014

from
http://support.apple.com/kb/ht3988

“How to disinfect the Apple internal or external keyboard, trackpad, and mouse… you should use Lysol Wipes or Clorox Kitchen Disinfecting wipes”

An example of this:

http://www.amazon.com/Clorox-Disinfecting-Wipes-105-Count-Canister/dp/B0036B89QC

However, this doesn’t include an ipad screen. For this, see: http://lifehacker.com/5665119/how-to-safely-disinfect-and-clean-your-gadgets

and the following products:

http://www.amazon.com/Klearscreen-iKlear-Apple-Polish-Kit/dp/B00078COKE and “recommended by Apple” Sanus Elements ELM104
http://store.apple.com/us/product/H6014LL/A

Encode-annotation interesting paper

April 14, 2014

recent publication from the Donnelly group comparing using GENCODE or Refeq annotation when predicting variants effects.
Choice of transcripts and software has a large effect on variant annotation
Genome Medicine 2014, 6:26 doi:10.1186/gm543

Processed pseudogenes acquired somatically during cancer development

April 12, 2014

http://www.nature.com/ncomms/2014/140409/ncomms4644/full/ncomms4644.html

Sex Determination Video

April 12, 2014

https://www.youtube.com/watch?v=kMWxuF9YW38#t=94

Three-Dimensional Genome Architecture Influences Partner Selection for Chromosomal Translocations in Human Disease

April 10, 2014

QT:"We show that many translocation-prone pairs of regions genome-wide, including the cancer translocation partners BCR-ABL and MYC-IGH, display elevated Hi-C contact frequencies in normal human cells."

Overlap of Hi-C & gene fusions

http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0044196

Synonymous mutations as driver mutations for cancer

April 10, 2014

http://ac.els-cdn.com/S0092867414001457/1-s2.0-S0092867414001457-main.pdf?_tid=82c57e74-c01a-11e3-95b3-00000aacb35e&acdnat=1397070764_5c441e4c90a317cc7642b6873f888eb6

http://www.sciencedirect.com/science/article/pii/S0092867414001457

Citi Bike Rides: September 17th & 18th, 2013 on Vimeo

April 7, 2014

Citi #Bike Rides 9/17/2013. Great #visualization of daily #network dynamics. Neat if applicable to cellular networks
http://vimeo.com/89305412

Developmental dynamics and disease potential of random monoallelic gene expression.

April 6, 2014

Developmental dynamics… of random monoallelic gene expression. #RNAseq on 100s of instances without causative SNPs

An analysis of differentiated cell lines.

http://www.cell.com/developmental-cell/abstract/S1534-5807(14)00057-4